File List

Here is a list of all files with brief descriptions:

[detail level 1234]

doc
▼ src	Root directory for the sourcecode
▼ classes	Directory for the Python type definitions
▼ FastaBuff	Directory for classes related to the FastaBuff class
FastaBuff.c	Implementations for the FastaBuff object
FastaBuff.h	Contains the definition of the FastaBuff object
FastaBuffViews.c
FastaBuffViews.h	Contains the definition of the FastaBuff_iterator object
▼ GtfDict	Directory for classes related to the GtfDict class
GtfDict.c	Implementation of the GtfDict class
GtfDict.h	Defines the GtfDict object interface
GtfDictViews.c
GtfDictViews.h	Defines the view types for the GtfDict class
▼ GtfList	Directory for classes related to the GtfList class
GtfList.c	Contains the implementation of the GtfList object
GtfList.h	Contains the definition of the GtfList object
GtfListViews.c
GtfListViews.h	Contains the definition of the GtfList view types
FastaReader.c	Implementation for the FastaReader and FastaFile classes
FastaReader.h	Header file for the FastaReader and FastaFile objects
GtfReader.c	Contains the implementation of the iterative GTF reader
GtfReader.h	This file defines the GtfReader and GtfFile object interface
▼ formats	Directory for C libraries for file format handling
fasta.c	Implementations for the FASTA module
fasta.h	Header file for the FASTA module
gtf.c	Implementations for the GTF module
gtf.h	Header file for the GTF module
▼ modules	Directory for modules
eccLib.c	Main library file
eccLib.h	EccLib module header
common.c	Contains implementations for common functions and structs used by the other modules
common.h	Contains common functions and structs used by the other modules
functions.c	Functions for parsing files. Core of the library
functions.h	Contains the declarations of the functions used in the eccLib module
hashmap_ext.c	Implementation of the hashmap_ext module
hashmap_ext.h	Contains the declarations for our extension of the hashmap module
reader.c	Implementation for the reader module
reader.h	Header for the reader module