fasta.c File Reference

Implementations for the FASTA module. More...

#include "fasta.h"
#include <limits.h>
#include <stdbool.h>
#include <stdint.h>

Include dependency graph for fasta.c:

Functions
void	initialize_fasta_binary_mapping ()
	Initializes the FASTA binary mapping.
char	getIUPACchar (uint8_t index, bool rna)
	Returns IUPAC FASTA character.
bool	is_valid_title (const char *title, size_t len)
	Checks if a FASTA title is valid.

Variables
uint8_t	fasta_binary_mapping [CHAR_MAX+1]
	A lookup table mapping FASTA characters to binary values.

Detailed Description

Implementations for the FASTA module.