FastaBuff.h File Reference

Contains the definition of the FastaBuff object. More...

#include <Python.h>
#include <stdbool.h>
#include <stdint.h>
#include <stdlib.h>

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Data Structures
struct	FastaBuff
	A buffer that holds packed uint4 FASTA data. More...

Macros
#define	FastaBuff_Check(op)   PyObject_TypeCheck(op, &FastaBuffType)
	Checks if the object is an instance of the FastaBuff type.

Functions
FastaBuff *	FastaBuff_new (uint8_t *restrict buff, size_t buffSize, size_t buffLen, bool RNA)
	Creates a new FastaBuff object.

Variables
PyTypeObject	FastaBuffType
	The Python type definition for the FastaBuff object.

Detailed Description

Contains the definition of the FastaBuff object.

Macro Definition Documentation

FastaBuff_Check

#define FastaBuff_Check

(

op

)

PyObject_TypeCheck(op, &FastaBuffType)

Checks if the object is an instance of the FastaBuff type.

Parameters

op	the object to check

Returns

1 if the object is an instance of the FastaBuff type, 0 otherwise

Function Documentation

FastaBuff_new()

FastaBuff * FastaBuff_new	(	uint8_t *restrict	buff,
		size_t	buffSize,
		size_t	buffLen,
		bool	RNA
	)

Creates a new FastaBuff object.

Parameters

buff	the buffer to use, this will be owned by the FastaBuff object
buffSize	the size of the buffer
buffLen	the length of the sequence
RNA	if true, T will be converted to U

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