Index

A

attributes() (eccLib.GtfDict method)

C

clear() (eccLib.GtfDict method) column() (eccLib.GtfList method) contains() (eccLib.GtfDict method)

count() (eccLib.FastaBuff method) (eccLib.FastaBuff_view method) coverage() (eccLib.GtfDict method)

D

dump() (eccLib.FastaBuff method)

E

eccLib module

end (eccLib.GtfDict attribute)

F

FastaBuff (class in eccLib) FastaBuff_iterator (class in eccLib) FastaBuff_view (class in eccLib) FastaFile (class in eccLib) FastaReader (class in eccLib)

feature (eccLib.GtfDict attribute) find() (eccLib.FastaBuff method) (eccLib.GtfList method) find_closest_bound() (eccLib.GtfList method) frame (eccLib.GtfDict attribute)

G

get() (eccLib.GtfDict method) get_annotated() (eccLib.FastaBuff method) (eccLib.FastaBuff_view method) get_contigs() (eccLib.GtfList method) GtfDict (class in eccLib) GtfDict_ItemView (class in eccLib)

GtfDict_KeyView (class in eccLib) GtfDict_ValueView (class in eccLib) GtfFile (class in eccLib) GtfList (class in eccLib) GtfList_ColumnIterator (class in eccLib) GtfList_ColumnView (class in eccLib) GtfReader (class in eccLib)

I

index() (eccLib.FastaBuff method) (eccLib.FastaBuff_view method)

items() (eccLib.GtfDict method)

K

keys() (eccLib.GtfDict method)

M

module eccLib

O

overlaps() (eccLib.GtfDict method)

P

parseFASTA() (in module eccLib) parseGTF() (in module eccLib)

pop() (eccLib.GtfDict method) popitem() (eccLib.GtfDict method)

R

reverse (eccLib.GtfDict attribute)

S

score (eccLib.GtfDict attribute) seqname (eccLib.GtfDict attribute) setdefault() (eccLib.GtfDict method)

source (eccLib.GtfDict attribute) sq_split() (eccLib.GtfList method) start (eccLib.GtfDict attribute)

V

values() (eccLib.GtfDict method)