Index

_

__add__() (eccLib.GtfList method) __contains__() (eccLib.FastaBuff method) (eccLib.GtfDict method) __delitem__() (eccLib.GtfDict method) __enter__() (eccLib.FastaFile method) (eccLib.GtfFile method) __eq__() (eccLib.FastaBuff method) (eccLib.GtfDict method) __exit__() (eccLib.FastaFile method) (eccLib.GtfFile method) __ge__() (eccLib.GtfDict method) __getitem__() (eccLib.FastaBuff method) (eccLib.GtfDict method) __gt__() (eccLib.GtfDict method) __hash__ (eccLib.FastaBuff attribute) __hash__() (eccLib.GtfDict method) __iadd__() (eccLib.GtfList method)

__iter__() (eccLib.FastaFile method) (eccLib.GtfDict method) (eccLib.GtfFile method) __le__() (eccLib.GtfDict method) __len__() (eccLib.FastaBuff method) (eccLib.GtfDict method) __lt__() (eccLib.GtfDict method) __ne__() (eccLib.FastaBuff method) (eccLib.GtfDict method) __next__() (eccLib.FastaReader method) (eccLib.GtfReader method) __repr__() (eccLib.GtfDict method) __setitem__() (eccLib.FastaBuff method) (eccLib.GtfDict method) __str__() (eccLib.FastaBuff method) (eccLib.GtfDict method) (eccLib.GtfList method)

C

column() (eccLib.GtfList method) contains() (eccLib.GtfDict method)

count() (eccLib.FastaBuff method) coverage() (eccLib.GtfDict method)

D

dump() (eccLib.FastaBuff method)

E

eccLib module

end (eccLib.GtfDict attribute)

F

FastaBuff (class in eccLib) FastaFile (class in eccLib) FastaReader (class in eccLib) feature (eccLib.GtfDict attribute)

find() (eccLib.FastaBuff method) (eccLib.GtfList method) find_closest_bound() (eccLib.GtfList method) frame (eccLib.GtfDict attribute)

G

get() (eccLib.GtfDict method) get_annotated() (eccLib.FastaBuff method) GtfDict (class in eccLib)

GtfFile (class in eccLib) GtfList (class in eccLib) GtfReader (class in eccLib)

I

index() (eccLib.FastaBuff method)

items() (eccLib.GtfDict method)

K

keys() (eccLib.GtfDict method)

M

module eccLib

O

overlaps() (eccLib.GtfDict method)

P

parseFASTA() (in module eccLib)

parseGTF() (in module eccLib) pop() (eccLib.GtfDict method)

R

reverse (eccLib.GtfDict attribute)

S

score (eccLib.GtfDict attribute) seqname (eccLib.GtfDict attribute)

source (eccLib.GtfDict attribute) sq_split() (eccLib.GtfList method) start (eccLib.GtfDict attribute)

U

update() (eccLib.GtfDict method)

V

values() (eccLib.GtfDict method)