eccLib documentation¶

Contents:

  • eccLib Module
    • GtfDict_ItemView
    • GtfDict_KeyView
    • GtfDict_ValueView
    • GtfDict
    • GtfList_ColumnIterator
    • GtfList_ColumnView
    • GtfList
    • GtfFile
    • GtfReader
    • FastaFile
    • FastaReader
    • FastaBuff_iterator
    • FastaBuff_view
    • FastaBuff
    • parseFASTA()
    • parseGTF()
  • eccLib Cookbook
    • GTF file parsing
    • GTF processing
    • Annotation processing
    • FASTA file parsing
  • Conversion guide
    • Numpy conversion
    • Pandas Conversion
    • PyTorch Conversion
    • Why isn’t this native?
  • FastaBuff encoding
    • IUPAC Nucleotide Codes
    • Mapping symbols to numbers
    • Advantages
    • Serialisation
  • Serialisation
    • GtfDict
    • FastaBuff
  • Publication
  • Internal documentation
  • Gitlab repository

eccLib

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Contents:

  • eccLib Module
  • eccLib Cookbook
  • Conversion guide
  • FastaBuff encoding
  • Serialisation
  • Publication
  • Internal documentation
  • Gitlab repository

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